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  5. Bra022309

Bra022309 (AP-3delta, PAT4, delta-ADR)


Aliases : AP-3delta, PAT4, delta-ADR

Description : large subunit delta of AP-3 Golgi to vacuole cargo adaptor complex


Gene families : OG0021505 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra022309
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_181


Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 29 586
No external refs found!