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  5. Bra002167

Bra002167


Description : regulatory protein of RNA homeostasis


Gene families : OG0002032 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra002167
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_125


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 270 294
IPR000571 Znf_CCCH 93 118
IPR000571 Znf_CCCH 314 340
IPR000571 Znf_CCCH 47 72
IPR000571 Znf_CCCH 139 163
No external refs found!