- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PCK1, ASL5, LBD12
Description : AS2/LOB-type transcription factor
Gene families : OG0002656 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002656_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra021612 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_64 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001101 | response to acid chemical | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004601 | peroxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006950 | response to stress | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006979 | response to oxidative stress | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009415 | response to water | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010035 | response to inorganic substance | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0020037 | heme binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050896 | response to stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902074 | response to salt | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 9 | 106 |
| No external refs found! |