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  5. Bra020884

Bra020884 (DDB1B)


Aliases : DDB1B

Description : core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes. core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes. adrenodoxin of mitochondrial ISC system assembly phase


Gene families : OG0013956 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020884
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_210


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0017183 protein histidyl modification to diphthamide IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018202 peptidyl-histidine modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 745 1057
IPR018846 Cleavage/polyA-sp_fac_asu_N 76 537
No external refs found!