Bra020658 (PME58)

Aliases : PME58

Description : EC_3.1 hydrolase acting on ester bond. pectin methylesterase

Gene families : OG0021821 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra020658
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_9

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001727	lipid kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003951	NAD+ kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004143	ATP-dependent diacylglycerol kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004659	prenyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006739	NADP metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006741	NADP biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008318	protein prenyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008483	transaminase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018342	protein prenylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0097354	prenylation	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	54	202
IPR000070	Pectinesterase_cat	258	554

External Links

No external refs found!

Bra020658 (PME58)

Expression Profile

Co-expression Networks

Functional Annotation