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  5. Bra020115

Bra020115 (GER3, GLP3A, ATGER3,...)


Aliases : GER3, GLP3A, ATGER3, GLP3, GLP3B

Description : not classified


Gene families : OG0002068 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra020115
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Bra006567 GER3, GLP3A,... not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030599 pectinesterase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Brassica rapa GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006045 Cupin_1 57 201
No external refs found!