Aliases : SNL6
Description : component *(SNL) of histone deacetylase machineries
Gene families : OG0003049 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra019933 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_180 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0000469 | obsolete cleavage involved in rRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006351 | DNA-templated transcription | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006399 | tRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016070 | RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016874 | ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0017076 | purine nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032553 | ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034660 | ncRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0036094 | small molecule binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043038 | amino acid activation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043039 | tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043168 | anion binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046483 | heterocycle metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |