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  5. Bra019898

Bra019898 (TIF3H1)


Aliases : TIF3H1

Description : component *(eIF3h) of eIF3 mRNA-to-PIC binding complex


Gene families : OG0001925 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra019898
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Bra031745 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_71461.1 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR045810 eIF3h_C 145 336
IPR000555 JAMM/MPN+_dom 23 127
No external refs found!