Bra001970 (gamma2-COP)

Aliases : gamma2-COP

Description : subunit gamma of cargo adaptor F-subcomplex

Gene families : OG0007416 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra001970
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_249

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004017	adenylate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR032154	Coatomer_g_Cpla	770	884
IPR002553	Clathrin/coatomer_adapt-like_N	29	542
IPR013040	Coatomer_gsu_app_Ig-like_dom	622	767

External Links

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Bra001970 (gamma2-COP)

Expression Profile

Co-expression Networks

Functional Annotation