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  5. Bra019564

Bra019564 (SPT1, ATSPT1)


Aliases : SPT1, ATSPT1

Description : EC_2.3 acyltransferase. catalytic component *(LCB2) of serine C-palmitoyltransferase complex


Gene families : OG0004703 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra019564
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_223


Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030906 retromer, cargo-selective complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043631 obsolete RNA polyadenylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 101 460
No external refs found!