Bra017800 (ATHSF4, TBF1,...)

Aliases : ATHSF4, TBF1, AT-HSFB1, HSF4, HSFB1

Description : HSF-type transcription factor

Gene families : OG0004892 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004892_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra017800
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_150

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003779	actin binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006465	signal peptide processing	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	12	101

External Links

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Bra017800 (ATHSF4, TBF1,...)

Expression Profile

Co-expression Networks

Functional Annotation