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  5. Bra016302

Bra016302


Description : not classified


Gene families : OG0003011 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra016302
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004357 glutamate-cysteine ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004474 malate synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004860 protein kinase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005785 signal recognition particle receptor complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006097 glyoxylate cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0018580 nitronate monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019210 kinase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046487 glyoxylate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Brassica rapa GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012458 DUF1664 91 212
No external refs found!