1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra016262

Bra016262 (ATAMY3, AMY3)


Aliases : ATAMY3, AMY3

Description : alpha amylase


Gene families : OG0013444 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra016262
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_30


Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004096 catalase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006547 histidine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 836 894
IPR006047 Glyco_hydro_13_cat_dom 527 788
No external refs found!