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Bra015153


Description : assembly factor (eIF1A) of eIF1


Gene families : OG0001228 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra015153
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Bra013204 No alias assembly factor (eIF1A) of eIF1 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 obsolete cleavage involved in rRNA processing IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035596 methylthiotransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050497 alkylthioltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 32 93
No external refs found!