Bra014870 (MVA1, FKP1, HMGS)

Aliases : MVA1, FKP1, HMGS

Description : EC_2.3 acyltransferase. 3-hydroxy-3-methylglutaryl-CoA synthase

Gene families : OG0011354 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra014870
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_25

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004421	hydroxymethylglutaryl-CoA synthase activity	IEA	Interproscan
BP	GO:0006084	acetyl-CoA metabolic process	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010142	farnesyl diphosphate biosynthetic process, mevalonate pathway	IEA	Interproscan
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045337	farnesyl diphosphate biosynthetic process	None	Extended
BP	GO:0045338	farnesyl diphosphate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902767	isoprenoid biosynthetic process via mevalonate	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001727	lipid kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004143	ATP-dependent diacylglycerol kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004506	squalene monooxygenase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013528	HMG_CoA_synth_N	2	174
IPR013746	HMG_CoA_synt_C_dom	175	451

External Links

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Bra014870 (MVA1, FKP1, HMGS)

Expression Profile

Co-expression Networks

Functional Annotation