Mp7g18520.1

Description : SSU processome assembly factor *(UTP6)

Gene families : OG0060398 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp7g18520.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20

Type	GO Term	Name	Evidence	Source
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0030490	maturation of SSU-rRNA	None	Extended
MF	GO:0030515	snoRNA binding	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004526	ribonuclease P activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004549	tRNA-specific ribonuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005643	nuclear pore	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005856	cytoskeleton	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005885	Arp2/3 protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017056	structural constituent of nuclear pore	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022618	protein-RNA complex assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032040	small-subunit processome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0034457	Mpp10 complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045010	actin nucleation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070475	rRNA base methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071826	protein-RNA complex organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013949	Utp6	9	93

External Links

No external refs found!

Mp7g18520.1

Expression Profile

Co-expression Networks

Functional Annotation