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  5. Mp7g13580.1

Mp7g13580.1


Description : pre-60S ribosomal subunit assembly factor *(NOP4)


Gene families : OG0059975 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp7g13580.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004526 ribonuclease P activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004549 tRNA-specific ribonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032970 regulation of actin filament-based process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0034457 Mpp10 complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1902903 regulation of supramolecular fiber organization IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 646 705
IPR000504 RRM_dom 32 102
IPR000504 RRM_dom 342 410
IPR000504 RRM_dom 802 871
No external refs found!