Aliases : ATG8D
Description : autophagosome ubiquitin-fold protein *(ATG8)
Gene families : OG0001196 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001196_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra013172 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_70 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003924 | GTPase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005681 | spliceosomal complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006694 | steroid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006766 | vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006886 | intracellular protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008202 | steroid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008610 | lipid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016229 | steroid dehydrogenase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016462 | pyrophosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016778 | diphosphotransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030117 | membrane coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030118 | clathrin coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030125 | clathrin vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030880 | RNA polymerase complex | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0030975 | thiamine binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043130 | ubiquitin binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043178 | alcohol binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043687 | post-translational protein modification | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0072488 | ammonium transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0098797 | plasma membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:1901681 | sulfur compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004241 | Atg8-like | 14 | 117 |
No external refs found! |