Bra013172 (ATG8D)


Aliases : ATG8D

Description : autophagosome ubiquitin-fold protein *(ATG8)


Gene families : OG0001196 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001196_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra013172
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_70


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004788 thiamine diphosphokinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030975 thiamine binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042357 thiamine diphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042723 thiamine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043178 alcohol binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!