Mp6g10930.1


Description : component *(uS4) of small ribosomal-subunit (SSU) proteome


Gene families : OG0002087 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp6g10930.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Bra008713 No alias component *(uS4) of small ribosomal-subunit (SSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006412 translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006810 transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008172 S-methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051179 localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098800 inner mitochondrial membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001912 Ribosomal_uS4_N 12 64
IPR002942 S4_RNA-bd 109 152
No external refs found!