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  5. Mp5g21170.1

Mp5g21170.1


Description : not classified


Gene families : OG0056999 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp5g21170.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003968 RNA-dependent RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030623 U5 snRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032970 regulation of actin filament-based process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1902903 regulation of supramolecular fiber organization IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 783 856
IPR011545 DEAD/DEAH_box_helicase_dom 344 498
IPR001650 Helicase_C 572 691
IPR014720 dsRBD_dom 51 106
IPR014720 dsRBD_dom 154 205
IPR011709 DEAD-box_helicase_OB_fold 941 1034
No external refs found!