- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : COL16, BBX15
Description : BBX class-III transcription factor
Gene families : OG0007832 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra012475 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_123 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006605 | protein targeting | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006612 | protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008312 | 7S RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009538 | photosystem I reaction center | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009725 | response to hormone | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009733 | response to auxin | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010033 | response to organic substance | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0010242 | oxygen evolving activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042221 | response to chemical | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042549 | photosystem II stabilization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045047 | protein targeting to ER | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0048500 | signal recognition particle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050896 | response to stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051668 | localization within membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072657 | protein localization to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |