Mp1g15560.1 (ATSGS3, SGS3)

Aliases : ATSGS3, SGS3

Description : stabilization factor *(SGS3) of transacting siRNA pathway

Gene families : OG0048374 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp1g15560.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_72

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	regulatory ncRNA-mediated gene silencing	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003674	molecular_function	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003713	transcription coactivator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004827	proline-tRNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016289	CoA hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046855	obsolete inositol phosphate dephosphorylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1990380	K48-linked deubiquitinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005381	Znf-XS_domain	592	630
IPR005380	XS_domain	666	780

External Links

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Mp1g15560.1 (ATSGS3, SGS3)

Expression Profile

Co-expression Networks

Functional Annotation