Coexpression cluster: Cluster_72 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 amino acid metabolic process 5.96% (9/151) 3.59 0.0 1.6e-05
GO:0006082 organic acid metabolic process 6.62% (10/151) 3.08 0.0 2.1e-05
GO:0043436 oxoacid metabolic process 6.62% (10/151) 3.09 0.0 2.6e-05
GO:0019752 carboxylic acid metabolic process 6.62% (10/151) 3.09 0.0 2.6e-05
GO:0003824 catalytic activity 32.45% (49/151) 0.93 2e-06 0.000126
GO:0044281 small molecule metabolic process 7.28% (11/151) 2.52 4e-06 0.000166
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.65% (4/151) 3.8 0.00019 0.003134
GO:0043039 tRNA aminoacylation 2.65% (4/151) 3.8 0.00019 0.003134
GO:0043038 amino acid activation 2.65% (4/151) 3.8 0.00019 0.003134
GO:0004812 aminoacyl-tRNA ligase activity 2.65% (4/151) 3.8 0.00019 0.003134
GO:0046451 diaminopimelate metabolic process 1.32% (2/151) 6.42 0.000179 0.003943
GO:0009089 lysine biosynthetic process via diaminopimelate 1.32% (2/151) 6.42 0.000179 0.003943
GO:0009085 lysine biosynthetic process 1.32% (2/151) 6.42 0.000179 0.003943
GO:0006553 lysine metabolic process 1.32% (2/151) 6.42 0.000179 0.003943
GO:0030259 lipid glycosylation 1.32% (2/151) 6.42 0.000179 0.003943
GO:0006418 tRNA aminoacylation for protein translation 2.65% (4/151) 3.92 0.000136 0.005122
GO:0008238 exopeptidase activity 1.99% (3/151) 4.27 0.000477 0.007402
GO:0016787 hydrolase activity 11.26% (17/151) 1.31 0.00052 0.007626
GO:0030258 lipid modification 1.32% (2/151) 5.42 0.000883 0.011095
GO:0043648 dicarboxylic acid metabolic process 1.32% (2/151) 5.42 0.000883 0.011095
GO:0009067 aspartate family amino acid biosynthetic process 1.32% (2/151) 5.42 0.000883 0.011095
GO:0140101 catalytic activity, acting on a tRNA 2.65% (4/151) 3.12 0.001147 0.01376
GO:0009066 aspartate family amino acid metabolic process 1.32% (2/151) 5.2 0.001229 0.01411
GO:0006399 tRNA metabolic process 2.65% (4/151) 2.94 0.001841 0.020248
GO:0044255 cellular lipid metabolic process 2.65% (4/151) 2.88 0.002163 0.022838
GO:1901605 alpha-amino acid metabolic process 1.99% (3/151) 3.38 0.00295 0.02995
GO:0003993 acid phosphatase activity 1.32% (2/151) 4.55 0.003154 0.030843
GO:0016491 oxidoreductase activity 9.93% (15/151) 1.12 0.003803 0.035858
GO:0046490 isopentenyl diphosphate metabolic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0050992 dimethylallyl diphosphate biosynthetic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0008837 diaminopimelate epimerase activity 0.66% (1/151) 7.01 0.007775 0.043673
GO:0004371 glycerone kinase activity 0.66% (1/151) 7.01 0.007775 0.043673
GO:0019682 glyceraldehyde-3-phosphate metabolic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0050993 dimethylallyl diphosphate metabolic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0006071 glycerol metabolic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0019400 alditol metabolic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 0.66% (1/151) 7.01 0.007775 0.043673
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 0.66% (1/151) 7.01 0.007775 0.043673
GO:0009240 isopentenyl diphosphate biosynthetic process 0.66% (1/151) 7.01 0.007775 0.043673
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 0.66% (1/151) 7.01 0.007775 0.043673
GO:0047661 amino-acid racemase activity 0.66% (1/151) 7.01 0.007775 0.043673
GO:0006426 glycyl-tRNA aminoacylation 0.66% (1/151) 7.01 0.007775 0.043673
GO:0004820 glycine-tRNA ligase activity 0.66% (1/151) 7.01 0.007775 0.043673
GO:0008236 serine-type peptidase activity 1.99% (3/151) 2.84 0.008554 0.045165
GO:0017171 serine hydrolase activity 1.99% (3/151) 2.84 0.008554 0.045165
GO:0005975 carbohydrate metabolic process 4.64% (7/151) 1.74 0.00515 0.045317
GO:0016874 ligase activity 2.65% (4/151) 2.52 0.005349 0.045549
GO:0070008 serine-type exopeptidase activity 1.32% (2/151) 4.2 0.00514 0.04679
GO:0008152 metabolic process 17.22% (26/151) 0.7 0.008523 0.046877
GO:0034660 ncRNA metabolic process 2.65% (4/151) 2.47 0.006003 0.049529
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_22 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_25 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_42 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_113 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (151) (download table)

InterPro Domains

GO Terms

Family Terms