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  5. Bra011624

Bra011624 (NFD4, NFD04, HMGB4)


Aliases : NFD4, NFD04, HMGB4

Description : DNA bending architectural protein *(HMG-B)


Gene families : OG0014478 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra011624
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034227 tRNA thio-modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042586 peptide deformylase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 35 104
No external refs found!