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  5. Bra011603

Bra011603 (ATGLR3.2, ATGLUR2,...)


Aliases : ATGLR3.2, ATGLUR2, GLR3.2, GLUR2

Description : ligand-gated cation channel *(GLR)


Gene families : OG0008284 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra011603
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_82


Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 50 408
IPR001320 Iontro_rcpt_C 808 842
IPR001638 Solute-binding_3/MltF_N 487 807
No external refs found!