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  5. Spov3_chr6.02146

Spov3_chr6.02146


Description : mRNA endoribonuclease *(G3BP)


Gene families : OG0065309 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02146
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_172


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 319 384
IPR002075 NTF2_dom 11 125
No external refs found!