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  5. Spov3_chr5.01306

Spov3_chr5.01306 (RS27A, ARS27A)


Aliases : RS27A, ARS27A

Description : component *(eS27) of small ribosomal-subunit (SSU) proteome


Gene families : OG0003126 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.01306
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bra003437 RS27A, ARS27A component *(eS27) of small ribosomal-subunit (SSU) proteome 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra007572 RS27A, ARS27A component *(eS27) of small ribosomal-subunit (SSU) proteome 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000592 Ribosomal_eS27 30 84
No external refs found!