Bra010808

Description : Prgrammed Cell Death regulatory factor *(PDCD5). metal cation transporter *(CorA)

Gene families : OG0004195 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004195_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra010808
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_181

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002836	PDCD5-like	518	632
IPR002523	MgTranspt_CorA/ZnTranspt_ZntB	334	470

External Links

No external refs found!