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  5. Spov3_chr5.00111

Spov3_chr5.00111 (UBP24)


Aliases : UBP24

Description : deubiquitinase *(UBP24)


Gene families : OG0071630 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.00111
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_146


Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 187 536
No external refs found!