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  5. Spov3_chr4.04090

Spov3_chr4.04090 (ISE2, EMB25, PDE317, 115J-4A)


Aliases : ISE2, EMB25, PDE317, 115J-4A

Description : group-II intron splicing RNA helicase *(ISE2)


Gene families : OG0016154 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.04090
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_102


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003937 IMP cyclohydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004814 arginine-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006420 arginyl-tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017038 protein import IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019238 cyclohydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019905 syntaxin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012961 Ski2/MTR4_C 996 1163
IPR011545 DEAD/DEAH_box_helicase_dom 152 304
No external refs found!