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  5. Spov3_chr4.01473

Spov3_chr4.01473 (THADA)


Aliases : THADA

Description : component *(TRM732) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex


Gene families : OG0002351 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.01473
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_100801.1 THADA component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003852 2-isopropylmalate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003883 CTP synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004055 argininosuccinate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006551 leucine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009098 leucine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042162 telomeric DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043047 single-stranded telomeric DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0098847 sequence-specific single stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019442 THADA/TRM732_DUF2428 1036 1362
No external refs found!