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  5. Spov3_chr3.05089

Spov3_chr3.05089


Description : acidic chitinase *(CHIA)


Gene families : OG0008422 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.05089
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_44


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005544 calcium-dependent phospholipid binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048364 root development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048731 system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 590 680
IPR002885 Pentatricopeptide_rpt 205 232
IPR002885 Pentatricopeptide_rpt 411 438
IPR002885 Pentatricopeptide_rpt 447 472
IPR002885 Pentatricopeptide_rpt 346 370
IPR002885 Pentatricopeptide_rpt 177 202
IPR002885 Pentatricopeptide_rpt 374 402
IPR002885 Pentatricopeptide_rpt 101 148
IPR002885 Pentatricopeptide_rpt 271 317
IPR046848 E_motif 490 554
IPR046849 Eplus_motif 559 585
IPR001223 Glyco_hydro18_cat 720 941
No external refs found!