Spov3_chr3.04392 (CSLD2, ATCSLD2)

Aliases : CSLD2, ATCSLD2

Description : mannan synthase *(CSLD)

Gene families : OG0000742 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.04392
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_146

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_3_19161.1	CSLD3, KJK, RHD7, ATCSLD3	mannan synthase *(CSLD)	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0000502	proteasome complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006606	protein import into nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006790	sulfur compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009894	regulation of catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015689	molybdate ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034504	protein localization to nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042176	regulation of protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051170	import into nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0061608	nuclear import signal receptor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0120227	acyl-CoA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901567	fatty acid derivative binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	378	1135

External Links

No external refs found!

Spov3_chr3.04392 (CSLD2, ATCSLD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation