Coexpression cluster: Cluster_47 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043412 macromolecule modification 17.11% (13/76) 1.78 9.2e-05 0.00633
GO:0019222 regulation of metabolic process 11.84% (9/76) 1.75 0.001381 0.007566
GO:0016301 kinase activity 13.16% (10/76) 1.62 0.001473 0.007759
GO:0031323 regulation of cellular metabolic process 11.84% (9/76) 1.75 0.001361 0.007769
GO:0060255 regulation of macromolecule metabolic process 11.84% (9/76) 1.76 0.001348 0.008029
GO:0032446 protein modification by small protein conjugation 3.95% (3/76) 3.8 0.001344 0.008367
GO:0080090 regulation of primary metabolic process 11.84% (9/76) 1.77 0.001241 0.008503
GO:0051171 regulation of nitrogen compound metabolic process 11.84% (9/76) 1.77 0.001241 0.008503
GO:0016567 protein ubiquitination 3.95% (3/76) 3.89 0.001123 0.008549
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.16% (10/76) 1.64 0.001312 0.008558
GO:0031326 regulation of cellular biosynthetic process 11.84% (9/76) 1.8 0.001114 0.008974
GO:0010556 regulation of macromolecule biosynthetic process 11.84% (9/76) 1.8 0.001114 0.008974
GO:0010468 regulation of gene expression 11.84% (9/76) 1.8 0.001114 0.008974
GO:0009889 regulation of biosynthetic process 11.84% (9/76) 1.8 0.001114 0.008974
GO:0036211 protein modification process 17.11% (13/76) 1.82 6.9e-05 0.009421
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.84% (9/76) 1.81 0.001054 0.011106
GO:0006793 phosphorus metabolic process 13.16% (10/76) 1.53 0.002285 0.011179
GO:0006796 phosphate-containing compound metabolic process 13.16% (10/76) 1.53 0.002285 0.011179
GO:0051252 regulation of RNA metabolic process 11.84% (9/76) 1.82 0.001007 0.011495
GO:0004842 ubiquitin-protein transferase activity 3.95% (3/76) 3.49 0.002489 0.011759
GO:0140096 catalytic activity, acting on a protein 17.11% (13/76) 1.52 0.000536 0.012229
GO:0006355 regulation of DNA-templated transcription 11.84% (9/76) 1.82 0.000992 0.012351
GO:2001141 regulation of RNA biosynthetic process 11.84% (9/76) 1.82 0.000992 0.012351
GO:0019787 ubiquitin-like protein transferase activity 3.95% (3/76) 3.42 0.002846 0.012578
GO:0019538 protein metabolic process 17.11% (13/76) 1.25 0.002806 0.012812
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.16% (10/76) 1.47 0.003117 0.013344
GO:0016740 transferase activity 21.05% (16/76) 1.33 0.000495 0.013556
GO:0016755 aminoacyltransferase activity 3.95% (3/76) 3.34 0.003291 0.013664
GO:0004672 protein kinase activity 13.16% (10/76) 1.71 0.000926 0.014099
GO:0043565 sequence-specific DNA binding 5.26% (4/76) 2.68 0.003605 0.014527
GO:1901564 organonitrogen compound metabolic process 18.42% (14/76) 1.15 0.003733 0.014611
GO:0016310 phosphorylation 13.16% (10/76) 1.72 0.000888 0.015215
GO:0140110 transcription regulator activity 9.21% (7/76) 2.34 0.000472 0.016168
GO:0006468 protein phosphorylation 13.16% (10/76) 1.72 0.000856 0.016753
GO:0003700 DNA-binding transcription factor activity 9.21% (7/76) 2.38 0.000398 0.018181
GO:0070647 protein modification by small protein conjugation or removal 3.95% (3/76) 3.15 0.0048 0.018266
GO:0050794 regulation of cellular process 11.84% (9/76) 1.37 0.007746 0.027925
GO:0043687 post-translational protein modification 3.95% (3/76) 2.9 0.007691 0.028479
GO:0050789 regulation of biological process 11.84% (9/76) 1.36 0.008141 0.028599
GO:0016746 acyltransferase activity 5.26% (4/76) 2.33 0.008388 0.028727
GO:0065007 biological regulation 11.84% (9/76) 1.35 0.008721 0.029142
GO:0008883 glutamyl-tRNA reductase activity 1.32% (1/76) 6.75 0.009256 0.030192
GO:0006807 nitrogen compound metabolic process 18.42% (14/76) 0.91 0.015315 0.048794
GO:0005509 calcium ion binding 3.95% (3/76) 2.52 0.015744 0.049022
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_8 0.023 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.029 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_43 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_64 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_85 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_86 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_101 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_109 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_115 0.038 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_147 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.023 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.032 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_167 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_174 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_186 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_190 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_195 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_202 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_226 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_227 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_234 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_239 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_248 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_262 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_263 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_267 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_268 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_271 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_273 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_299 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_76 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_165 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_221 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_82 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_140 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (76) (download table)

InterPro Domains

GO Terms

Family Terms