ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0003674 | molecular_function | 54.46% (55/101) | 0.88 | 0.0 | 3.4e-05 |
GO:0003700 | DNA-binding transcription factor activity | 6.93% (7/101) | 3.55 | 2e-06 | 0.000275 |
GO:0140110 | transcription regulator activity | 6.93% (7/101) | 3.43 | 4e-06 | 0.000319 |
GO:0043565 | sequence-specific DNA binding | 4.95% (5/101) | 3.93 | 2e-05 | 0.001141 |
GO:0003824 | catalytic activity | 31.68% (32/101) | 1.03 | 3.8e-05 | 0.00172 |
GO:0016491 | oxidoreductase activity | 9.9% (10/101) | 2.11 | 0.000114 | 0.004303 |
GO:0031326 | regulation of cellular biosynthetic process | 6.93% (7/101) | 2.26 | 0.000675 | 0.006631 |
GO:0010468 | regulation of gene expression | 6.93% (7/101) | 2.26 | 0.000675 | 0.006631 |
GO:0009889 | regulation of biosynthetic process | 6.93% (7/101) | 2.26 | 0.000675 | 0.006631 |
GO:0010556 | regulation of macromolecule biosynthetic process | 6.93% (7/101) | 2.26 | 0.000675 | 0.006631 |
GO:0019222 | regulation of metabolic process | 6.93% (7/101) | 2.19 | 0.000885 | 0.007695 |
GO:0060255 | regulation of macromolecule metabolic process | 6.93% (7/101) | 2.2 | 0.000876 | 0.007915 |
GO:0031323 | regulation of cellular metabolic process | 6.93% (7/101) | 2.2 | 0.000876 | 0.007915 |
GO:0008194 | UDP-glycosyltransferase activity | 3.96% (4/101) | 3.52 | 0.000421 | 0.007924 |
GO:0065007 | biological regulation | 7.92% (8/101) | 2.07 | 0.000674 | 0.00802 |
GO:0080090 | regulation of primary metabolic process | 6.93% (7/101) | 2.27 | 0.000659 | 0.008278 |
GO:0051171 | regulation of nitrogen compound metabolic process | 6.93% (7/101) | 2.27 | 0.000659 | 0.008278 |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | 6.93% (7/101) | 2.34 | 0.000482 | 0.008376 |
GO:0051252 | regulation of RNA metabolic process | 6.93% (7/101) | 2.38 | 0.000414 | 0.008505 |
GO:2001141 | regulation of RNA biosynthetic process | 6.93% (7/101) | 2.4 | 0.000378 | 0.008544 |
GO:0006355 | regulation of DNA-templated transcription | 6.93% (7/101) | 2.4 | 0.000378 | 0.008544 |
GO:0019842 | vitamin binding | 2.97% (3/101) | 4.18 | 0.000616 | 0.008697 |
GO:0050794 | regulation of cellular process | 7.92% (8/101) | 2.11 | 0.000563 | 0.009089 |
GO:0050789 | regulation of biological process | 7.92% (8/101) | 2.09 | 0.000604 | 0.009106 |
GO:0016757 | glycosyltransferase activity | 4.95% (5/101) | 2.68 | 0.001159 | 0.009703 |
GO:0016740 | transferase activity | 13.86% (14/101) | 1.51 | 0.000376 | 0.010627 |
GO:0005544 | calcium-dependent phospholipid binding | 1.98% (2/101) | 6.11 | 0.000368 | 0.011884 |
GO:0043168 | anion binding | 11.88% (12/101) | 1.39 | 0.002029 | 0.01638 |
GO:0008171 | O-methyltransferase activity | 1.98% (2/101) | 4.62 | 0.002989 | 0.021788 |
GO:0036094 | small molecule binding | 11.88% (12/101) | 1.33 | 0.002897 | 0.021822 |
GO:0034975 | protein folding in endoplasmic reticulum | 0.99% (1/101) | 8.43 | 0.002896 | 0.022569 |
GO:0050832 | defense response to fungus | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0004325 | ferrochelatase activity | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0051707 | response to other organism | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0098542 | defense response to other organism | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0043207 | response to external biotic stimulus | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0044419 | biological process involved in interspecies interaction between organisms | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0042742 | defense response to bacterium | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0009620 | response to fungus | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0009617 | response to bacterium | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0009607 | response to biotic stimulus | 0.99% (1/101) | 7.43 | 0.005784 | 0.029708 |
GO:0005509 | calcium ion binding | 2.97% (3/101) | 3.02 | 0.006194 | 0.03111 |
GO:0043167 | ion binding | 16.83% (17/101) | 1.0 | 0.004408 | 0.031131 |
GO:0005488 | binding | 29.7% (30/101) | 0.64 | 0.00656 | 0.032231 |
GO:0004601 | peroxidase activity | 2.97% (3/101) | 2.96 | 0.006883 | 0.03241 |
GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | 2.97% (3/101) | 2.96 | 0.006883 | 0.03241 |
GO:0008150 | biological_process | 25.74% (26/101) | 0.73 | 0.0052 | 0.035613 |
GO:0016209 | antioxidant activity | 2.97% (3/101) | 2.9 | 0.007768 | 0.035828 |
GO:0005543 | phospholipid binding | 1.98% (2/101) | 4.15 | 0.005739 | 0.038144 |
GO:0006783 | heme biosynthetic process | 0.99% (1/101) | 6.85 | 0.008663 | 0.03839 |
GO:0016972 | thiol oxidase activity | 0.99% (1/101) | 6.85 | 0.008663 | 0.03839 |
GO:1901363 | heterocyclic compound binding | 20.79% (21/101) | 0.78 | 0.00911 | 0.038846 |
GO:0097159 | organic cyclic compound binding | 20.79% (21/101) | 0.78 | 0.00911 | 0.038846 |
GO:0070279 | vitamin B6 binding | 1.98% (2/101) | 3.76 | 0.009654 | 0.03967 |
GO:0030170 | pyridoxal phosphate binding | 1.98% (2/101) | 3.76 | 0.009654 | 0.03967 |
GO:0016773 | phosphotransferase activity, alcohol group as acceptor | 6.93% (7/101) | 1.56 | 0.009906 | 0.039979 |
GO:0016301 | kinase activity | 6.93% (7/101) | 1.54 | 0.010604 | 0.042045 |
GO:0046148 | pigment biosynthetic process | 0.99% (1/101) | 6.43 | 0.011534 | 0.042045 |
GO:0030976 | thiamine pyrophosphate binding | 0.99% (1/101) | 6.43 | 0.011534 | 0.042045 |
GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | 0.99% (1/101) | 6.43 | 0.011534 | 0.042045 |
GO:0050997 | quaternary ammonium group binding | 0.99% (1/101) | 6.43 | 0.011534 | 0.042045 |
GO:0046906 | tetrapyrrole binding | 3.96% (4/101) | 2.18 | 0.012068 | 0.043293 |
GO:0020037 | heme binding | 3.96% (4/101) | 2.21 | 0.011162 | 0.043492 |
GO:0042168 | heme metabolic process | 0.99% (1/101) | 6.11 | 0.014398 | 0.047157 |
GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | 0.99% (1/101) | 6.11 | 0.014398 | 0.047157 |
GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | 0.99% (1/101) | 6.11 | 0.014398 | 0.047157 |
GO:0009605 | response to external stimulus | 0.99% (1/101) | 6.11 | 0.014398 | 0.047157 |
GO:0001727 | lipid kinase activity | 0.99% (1/101) | 6.11 | 0.014398 | 0.047157 |
GO:0004143 | ATP-dependent diacylglycerol kinase activity | 0.99% (1/101) | 6.11 | 0.014398 | 0.047157 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_60 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_31 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_5 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_20 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_22 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_39 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_48 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_52 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_57 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_61 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_72 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_87 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_99 | 0.019 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_124 | 0.025 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_133 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_163 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_178 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_206 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_209 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_212 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_314 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_440 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_905 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |