Coexpression cluster: Cluster_41 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016853 isomerase activity 5.1% (10/196) 3.84 0.0 1e-06
GO:0015979 photosynthesis 3.57% (7/196) 4.82 0.0 1e-06
GO:0003824 catalytic activity 31.63% (62/196) 1.03 0.0 1e-06
GO:0016859 cis-trans isomerase activity 3.57% (7/196) 4.67 0.0 1e-06
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.57% (7/196) 4.67 0.0 1e-06
GO:0016491 oxidoreductase activity 10.2% (20/196) 2.15 0.0 1e-06
GO:0009654 photosystem II oxygen evolving complex 2.55% (5/196) 5.71 0.0 2e-06
GO:1990204 oxidoreductase complex 2.55% (5/196) 5.48 0.0 3e-06
GO:0009523 photosystem II 2.55% (5/196) 5.27 0.0 6e-06
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 2.04% (4/196) 6.15 0.0 6e-06
GO:0009521 photosystem 2.55% (5/196) 4.48 3e-06 8.6e-05
GO:0051287 NAD binding 2.55% (5/196) 4.18 8e-06 0.000219
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.04% (4/196) 4.72 1.5e-05 0.000373
GO:0003674 molecular_function 42.86% (84/196) 0.54 5.1e-05 0.00114
GO:0019898 extrinsic component of membrane 1.53% (3/196) 5.25 6.1e-05 0.001281
GO:0098796 membrane protein complex 3.06% (6/196) 3.05 9.4e-05 0.001848
GO:0051540 metal cluster binding 2.04% (4/196) 3.95 0.000131 0.002183
GO:0006091 generation of precursor metabolites and energy 2.04% (4/196) 3.95 0.000131 0.002183
GO:0051536 iron-sulfur cluster binding 2.04% (4/196) 3.95 0.000131 0.002183
GO:1902494 catalytic complex 2.55% (5/196) 2.91 0.000558 0.00881
GO:0004177 aminopeptidase activity 1.02% (2/196) 5.67 0.000648 0.009748
GO:0036094 small molecule binding 10.2% (20/196) 1.11 0.00104 0.014945
GO:0050661 NADP binding 1.53% (3/196) 3.77 0.001376 0.017398
GO:0004176 ATP-dependent peptidase activity 1.02% (2/196) 5.15 0.001373 0.018075
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.02% (2/196) 5.15 0.001373 0.018075
GO:0000166 nucleotide binding 9.69% (19/196) 1.09 0.001645 0.019249
GO:1901265 nucleoside phosphate binding 9.69% (19/196) 1.09 0.001645 0.019249
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.02% (2/196) 4.89 0.001999 0.020372
GO:0016860 intramolecular oxidoreductase activity 1.02% (2/196) 4.89 0.001999 0.020372
GO:0009064 glutamine family amino acid metabolic process 1.02% (2/196) 4.89 0.001999 0.020372
GO:0009084 glutamine family amino acid biosynthetic process 1.02% (2/196) 4.89 0.001999 0.020372
GO:0008152 metabolic process 16.33% (32/196) 0.71 0.003651 0.034961
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.02% (2/196) 4.48 0.00358 0.035356
GO:0044237 cellular metabolic process 11.73% (23/196) 0.87 0.003815 0.035456
GO:0006082 organic acid metabolic process 2.55% (5/196) 2.19 0.005031 0.042968
GO:0043436 oxoacid metabolic process 2.55% (5/196) 2.2 0.004924 0.043222
GO:0019752 carboxylic acid metabolic process 2.55% (5/196) 2.2 0.004924 0.043222
GO:0017076 purine nucleotide binding 8.67% (17/196) 1.0 0.005334 0.044358
GO:0005542 folic acid binding 0.51% (1/196) 7.48 0.00562 0.044399
GO:0072341 modified amino acid binding 0.51% (1/196) 7.48 0.00562 0.044399
GO:0008237 metallopeptidase activity 1.53% (3/196) 2.99 0.006431 0.049569
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_41 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_111 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_147 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_153 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_214 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_75 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_196 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_204 0.021 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_5 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_40 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_69 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_78 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_97 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_314 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (196) (download table)

InterPro Domains

GO Terms

Family Terms