Coexpression cluster: Cluster_12 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009733 response to auxin 2.14% (4/187) 5.37 2e-06 0.000792
GO:0009719 response to endogenous stimulus 2.14% (4/187) 4.5 2.9e-05 0.00199
GO:0009725 response to hormone 2.14% (4/187) 4.5 2.9e-05 0.00199
GO:0003690 double-stranded DNA binding 2.14% (4/187) 4.41 3.7e-05 0.002104
GO:0010033 response to organic substance 2.14% (4/187) 4.33 4.6e-05 0.002256
GO:0008150 biological_process 27.27% (51/187) 0.82 2.5e-05 0.002868
GO:0042221 response to chemical 2.14% (4/187) 4.15 7.6e-05 0.003276
GO:0006629 lipid metabolic process 4.28% (8/187) 2.82 2.1e-05 0.003521
GO:0051536 iron-sulfur cluster binding 2.14% (4/187) 4.02 0.00011 0.003757
GO:0051540 metal cluster binding 2.14% (4/187) 4.02 0.00011 0.003757
GO:0016859 cis-trans isomerase activity 2.14% (4/187) 3.93 0.00014 0.004014
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.14% (4/187) 3.93 0.00014 0.004014
GO:0009523 photosystem II 1.6% (3/187) 4.6 0.000248 0.00655
GO:0044255 cellular lipid metabolic process 2.67% (5/187) 3.07 0.00034 0.008331
GO:0000413 protein peptidyl-prolyl isomerization 1.6% (3/187) 4.37 0.000404 0.008652
GO:0018208 peptidyl-proline modification 1.6% (3/187) 4.37 0.000404 0.008652
GO:0006082 organic acid metabolic process 3.21% (6/187) 2.52 0.000671 0.011506
GO:0043436 oxoacid metabolic process 3.21% (6/187) 2.53 0.000653 0.01179
GO:0019752 carboxylic acid metabolic process 3.21% (6/187) 2.53 0.000653 0.01179
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 1.07% (2/187) 5.74 0.00059 0.011905
GO:0051537 2 iron, 2 sulfur cluster binding 1.07% (2/187) 5.37 0.001004 0.016404
GO:0009521 photosystem 1.6% (3/187) 3.81 0.001295 0.020194
GO:0018193 peptidyl-amino acid modification 1.6% (3/187) 3.74 0.001493 0.022268
GO:0009987 cellular process 16.58% (31/187) 0.77 0.002239 0.031994
GO:0019898 extrinsic component of membrane 1.07% (2/187) 4.74 0.002494 0.032906
GO:0008610 lipid biosynthetic process 2.14% (4/187) 2.84 0.002425 0.033267
GO:0008883 glutamyl-tRNA reductase activity 0.53% (1/187) 7.54 0.005362 0.041799
GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor 0.53% (1/187) 7.54 0.005362 0.041799
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 0.53% (1/187) 7.54 0.005362 0.041799
GO:0005315 inorganic phosphate transmembrane transporter activity 0.53% (1/187) 7.54 0.005362 0.041799
GO:0098809 nitrite reductase activity 0.53% (1/187) 7.54 0.005362 0.041799
GO:0008942 nitrite reductase [NAD(P)H] activity 0.53% (1/187) 7.54 0.005362 0.041799
GO:0006450 regulation of translational fidelity 0.53% (1/187) 7.54 0.005362 0.041799
GO:0004455 ketol-acid reductoisomerase activity 0.53% (1/187) 7.54 0.005362 0.041799
GO:0006817 phosphate ion transport 0.53% (1/187) 7.54 0.005362 0.041799
GO:0008152 metabolic process 16.58% (31/187) 0.73 0.003303 0.041961
GO:0008299 isoprenoid biosynthetic process 1.07% (2/187) 4.46 0.003689 0.043628
GO:0009654 photosystem II oxygen evolving complex 1.07% (2/187) 4.46 0.003689 0.043628
GO:0032787 monocarboxylic acid metabolic process 1.6% (3/187) 3.22 0.004148 0.047424
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_41 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_133 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_213 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_237 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_52 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_75 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_5 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_13 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_26 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_49 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_51 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_54 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_69 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_72 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_78 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_115 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_136 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_175 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_237 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (187) (download table)

InterPro Domains

GO Terms

Family Terms