Coexpression cluster: Cluster_50 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003677 DNA binding 26.4% (47/178) 3.31 0.0 0.0
GO:1901363 heterocyclic compound binding 44.38% (79/178) 1.69 0.0 0.0
GO:0097159 organic cyclic compound binding 44.38% (79/178) 1.69 0.0 0.0
GO:0003676 nucleic acid binding 26.4% (47/178) 2.37 0.0 0.0
GO:0005488 binding 52.25% (93/178) 1.22 0.0 0.0
GO:0008017 microtubule binding 7.87% (14/178) 5.06 0.0 0.0
GO:0003777 microtubule motor activity 7.3% (13/178) 5.34 0.0 0.0
GO:0007018 microtubule-based movement 7.3% (13/178) 5.34 0.0 0.0
GO:0015631 tubulin binding 7.87% (14/178) 4.92 0.0 0.0
GO:0007017 microtubule-based process 7.3% (13/178) 5.06 0.0 0.0
GO:0003774 cytoskeletal motor activity 7.3% (13/178) 5.0 0.0 0.0
GO:0008092 cytoskeletal protein binding 7.87% (14/178) 4.47 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 18.54% (33/178) 1.68 0.0 0.0
GO:0005524 ATP binding 16.85% (30/178) 1.72 0.0 0.0
GO:0140657 ATP-dependent activity 8.43% (15/178) 2.73 0.0 0.0
GO:0000786 nucleosome 2.81% (5/178) 5.7 0.0 0.0
GO:0032993 protein-DNA complex 2.81% (5/178) 5.63 0.0 0.0
GO:0034728 nucleosome organization 2.81% (5/178) 5.39 0.0 1e-06
GO:0006334 nucleosome assembly 2.81% (5/178) 5.39 0.0 1e-06
GO:0032553 ribonucleotide binding 18.54% (33/178) 1.45 0.0 1e-06
GO:0032555 purine ribonucleotide binding 18.54% (33/178) 1.46 0.0 1e-06
GO:0097367 carbohydrate derivative binding 18.54% (33/178) 1.44 0.0 1e-06
GO:0065004 protein-DNA complex assembly 2.81% (5/178) 5.34 0.0 1e-06
GO:0017076 purine nucleotide binding 18.54% (33/178) 1.38 0.0 2e-06
GO:0006338 chromatin remodeling 2.81% (5/178) 5.09 0.0 2e-06
GO:0032559 adenyl ribonucleotide binding 16.85% (30/178) 1.47 0.0 2e-06
GO:0006325 chromatin organization 2.81% (5/178) 4.96 1e-06 4e-06
GO:0071824 protein-DNA complex organization 2.81% (5/178) 4.92 1e-06 4e-06
GO:1901265 nucleoside phosphate binding 18.54% (33/178) 1.32 1e-06 6e-06
GO:0000166 nucleotide binding 18.54% (33/178) 1.32 1e-06 6e-06
GO:0043168 anion binding 18.54% (33/178) 1.31 1e-06 6e-06
GO:0030554 adenyl nucleotide binding 16.85% (30/178) 1.39 1e-06 6e-06
GO:0003674 molecular_function 54.49% (97/178) 0.57 1e-06 6e-06
GO:0016043 cellular component organization 5.62% (10/178) 2.85 2e-06 8e-06
GO:0036094 small molecule binding 18.54% (33/178) 1.27 2e-06 1e-05
GO:0071840 cellular component organization or biogenesis 5.62% (10/178) 2.79 2e-06 1.1e-05
GO:0005515 protein binding 16.85% (30/178) 1.34 2e-06 1.1e-05
GO:0065003 protein-containing complex assembly 2.81% (5/178) 3.68 4.6e-05 0.00021
GO:0043933 protein-containing complex organization 2.81% (5/178) 3.44 0.000105 0.000467
GO:0022607 cellular component assembly 2.81% (5/178) 3.41 0.000115 0.000499
GO:0051276 chromosome organization 2.25% (4/178) 3.89 0.000158 0.000668
GO:0009987 cellular process 23.03% (41/178) 0.73 0.000679 0.002798
GO:0006996 organelle organization 2.25% (4/178) 3.22 0.000937 0.00377
GO:0005694 chromosome 1.12% (2/178) 5.31 0.001114 0.00438
GO:0043167 ion binding 19.1% (34/178) 0.74 0.001883 0.007239
GO:0003682 chromatin binding 1.12% (2/178) 3.87 0.008322 0.031298
GO:0007076 mitotic chromosome condensation 0.56% (1/178) 6.77 0.009129 0.032229
GO:0000796 condensin complex 0.56% (1/178) 6.77 0.009129 0.032229
GO:0030261 chromosome condensation 0.56% (1/178) 6.77 0.009129 0.032229
GO:0006269 DNA replication, synthesis of RNA primer 0.56% (1/178) 6.19 0.013662 0.047269
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_2 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_31 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_170 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_189 0.023 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_215 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_8 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_14 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_37 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_54 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_57 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_83 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_97 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_122 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_160 0.022 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_300 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_50 0.025 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_77 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (178) (download table)

InterPro Domains

GO Terms

Family Terms