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  5. Spov3_chr3.03289

Spov3_chr3.03289


Description : homologous recombination repair factor *(MDC1)


Gene families : OG0067413 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.03289
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_171


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003989 acetyl-CoA carboxylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009317 acetyl-CoA carboxylase complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016421 CoA carboxylase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001357 BRCT_dom 790 872
No external refs found!