Bra009837 (SHN3)


Aliases : SHN3

Description : cutin and suberin biosynthesis transcription factor *(SHN)


Gene families : OG0013177 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra009837
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_166


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006810 transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009092 homoserine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015706 nitrate transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019346 transsulfuration IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046903 secretion IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050667 homocysteine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051179 localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901698 response to nitrogen compound IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902025 nitrate import IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Brassica rapa GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 9 36
No external refs found!