Bra009826 (KNAT3)

Aliases : KNAT3

Description : KNOX-type transcription factor

Gene families : OG0000911 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000911_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra009826
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_242

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000160	phosphorelay signal transduction system	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004659	prenyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008252	nucleotidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008253	5'-nucleotidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008318	protein prenyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009166	nucleotide catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009264	deoxyribonucleotide catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018342	protein prenylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0097354	prenylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	357	384
IPR005540	KNOX1	150	190
IPR005539	ELK_dom	312	333
IPR005541	KNOX2	207	257

External Links

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Bra009826 (KNAT3)

Expression Profile

Co-expression Networks

Functional Annotation