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  5. Spov3_chr2.05173

Spov3_chr2.05173 (CRK8)


Aliases : CRK8

Description : not classified


Gene families : OG0003756 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003756_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.05173
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr5.03683 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029472 Copia-like_N 16 63
IPR005162 Retrotrans_gag_dom 82 154
No external refs found!