Heatmap: Cluster_134 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
0.0 -2.38 -1.1 -0.13 -1.2 -0.98 -3.91 -2.01 -1.1 -1.76 -2.73 -0.85 -0.51 -0.58 -2.22 -1.19 - -0.82 -4.0 - -0.36 -0.39 4.14 -1.16 -1.79 -0.67 -2.14 -1.12 -2.06 -0.71
-1.81 -1.99 -1.47 -2.28 -0.69 -1.8 -1.94 -3.8 -0.53 - -3.86 -2.47 -1.82 -1.35 -2.09 -2.4 -2.3 0.08 -2.45 -0.98 -1.56 -0.88 4.45 -3.8 - -1.24 -3.89 -2.87 -3.63 -2.4
-6.51 - - -3.62 - -6.25 -5.71 -4.23 -7.58 - -7.39 -4.69 1.11 -3.22 -3.01 -4.11 -4.18 0.05 -7.69 -6.16 - - 4.71 -5.66 - -6.89 -7.99 -6.45 - -3.57
- - 1.98 - - - - - - - - - - - - - - 2.04 - - - 1.86 4.2 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
-1.21 -1.69 -3.13 -3.63 -1.06 -3.56 -3.4 -2.53 -4.07 -2.97 -3.49 -4.2 -2.03 -0.54 -2.32 -3.83 -3.82 -0.22 -3.88 -3.78 -3.95 -3.7 4.63 -3.93 -3.55 -4.6 -3.11 -2.82 -2.43 -3.16
-2.37 -0.31 - -0.01 -2.48 -1.53 - - -2.41 -0.45 -2.28 - - -2.41 -2.55 - - 1.63 -0.96 -1.11 - - 3.94 1.3 - 0.53 0.57 - -1.29 -0.42
- - - - - - - - - - - - - - - - - 4.03 - - - - 3.78 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
- -0.34 - -0.49 - - -0.56 -0.44 - 0.63 -0.41 - - -0.28 - 1.19 1.07 -0.44 - - -0.76 - 4.03 - - - - - -0.62 0.4
-0.91 -1.26 -2.2 -3.02 -0.68 -0.83 -0.07 -3.19 - -2.82 - -4.65 0.28 -2.78 - - - 1.73 -3.45 -4.97 -2.16 - 4.31 -1.18 - -2.19 -3.69 -2.31 -2.6 -1.73
- - - - - - - - - - - - - - - - - 2.83 - - - - 4.52 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
- -3.81 - - -1.84 - - - - - - - 0.93 -0.92 - - - 1.89 -4.8 - - - 4.55 - - -4.11 -5.11 -4.76 - -
- - - - - - - - - - - - 0.76 - - - - - - - - - 4.51 0.78 - - - 1.9 - -
- - - -0.48 - - -1.15 - -2.04 -2.28 - -2.45 -0.19 0.3 - - - 2.9 - - -2.31 - 4.09 -2.35 -2.28 -2.39 - -2.25 -2.15 -1.47
- - - - - -5.82 - - - - - -5.6 1.77 -1.88 - - - 1.43 - -4.86 - - 4.55 -5.69 - -5.7 - - - -3.77
- - - - - - - - - 2.63 - - - - - - - - - - - - 4.57 - - - - - - -
-4.53 -4.67 - -4.0 -1.69 -4.28 - -1.85 - -4.67 -3.11 - -4.71 -4.44 - -3.78 -3.87 -0.85 -2.25 - - -4.85 4.77 - - -2.02 -2.29 -2.04 - -
- -0.33 - 0.11 -1.77 - - 0.2 -0.48 -1.44 - - 0.6 - - - -0.56 2.41 0.65 -1.62 - - 3.81 0.01 - - -1.4 -1.22 -1.48 -
-1.96 -2.68 -1.64 -2.27 -1.91 -2.13 -2.86 -1.2 -3.15 -3.05 -1.98 -2.04 -1.29 -2.1 -1.54 -3.84 -2.19 0.24 -5.48 -2.3 -5.84 -3.05 4.5 -3.58 -4.53 -2.19 -2.22 -2.82 -1.43 -0.4
-4.96 -6.87 -6.12 -7.57 -3.99 -3.9 -5.31 -6.55 -5.93 -6.17 -6.12 -5.87 -1.06 -4.28 -3.81 -5.1 -4.96 0.58 -5.69 -5.82 -6.4 -6.07 4.77 -5.81 -5.99 -5.42 -7.16 -5.96 -5.92 -5.86
- -1.43 - - 1.84 0.3 0.38 - - - - - 1.16 -1.52 0.67 - - 2.62 - - - - 3.54 - - -1.8 - - -1.62 -0.04
- -3.87 - -0.35 - - - -1.84 - - - - -0.4 -0.73 -1.5 0.14 -0.29 1.56 -2.78 -2.66 -2.88 -2.24 4.38 -0.9 - -3.16 -3.06 - - -
0.24 -0.02 -0.8 -0.81 0.35 -2.11 -1.83 -2.44 -1.16 -1.17 -1.26 -2.04 -0.16 -0.59 -0.89 -1.27 -0.93 -1.1 -1.2 -1.86 -1.22 -1.61 3.8 -1.26 -0.91 -1.37 -0.5 -0.13 -0.46 -0.9
- - - - - - - - - - - - - - - - - 3.25 - - - - 4.36 - - - - - - -
-1.39 -1.32 -1.22 -0.77 -2.15 -1.23 -2.19 -1.56 -3.24 -1.66 -1.94 -1.62 0.87 -4.39 -2.95 -1.7 -1.16 -2.16 -0.63 -1.42 -1.46 -0.86 4.09 0.22 -0.15 -2.39 -0.88 -1.09 -2.04 -0.98
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
- -1.55 - - - - - - - - - -1.81 0.35 - -1.81 - - 3.06 - - - - 4.23 -0.53 - - - - - -
Spov3_chr2.02269 (UGT71C2)
-2.77 -3.0 -5.47 -3.62 -2.7 -4.47 -4.68 -5.96 -4.42 -3.75 -4.3 -4.2 -2.12 -2.86 -3.78 -3.98 -4.66 0.23 -7.35 -4.67 -4.19 -4.85 4.75 -4.56 -7.4 -4.1 -4.9 -3.53 -4.93 -4.27
Spov3_chr2.02352 (EXO70D2)
- - 0.97 -0.65 - - - - - - - - 0.49 0.5 -0.75 - - - - - - - 4.51 - 0.19 - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
Spov3_chr2.02829 (CYP81D2)
-1.49 -1.26 -0.63 -0.58 -0.64 -2.33 -2.75 -0.73 -0.96 -1.02 -1.75 -1.22 -0.95 -3.14 -1.75 -2.8 -2.66 -0.79 -0.98 -1.72 -1.41 -1.42 4.09 -1.0 -0.18 -1.53 -0.41 0.01 -0.66 -3.33
- -3.49 -3.49 - - -2.77 - -3.49 - - - - -1.2 -3.7 - - - -1.19 -2.76 - -2.61 -1.25 4.78 - - -3.7 - -1.74 - -
- 1.72 0.5 - - - - - - - - - - - - - 0.68 2.01 - - - - 3.93 - 0.42 - - - 1.64 -
- - - - -1.67 - - -3.33 - - - - -0.87 - -1.65 - - - - - - - 4.83 - - - - -2.41 - -
- -0.88 - - -1.37 -1.22 - - -0.09 -1.06 0.09 - - - - - - - - - - - 4.57 -0.18 - - - 0.01 - -1.02
- - - - - - - - - - - - - - - - - 2.65 - - - - 4.57 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
- -2.38 - - -1.46 -29.47 - -2.61 - - - - -2.73 - - - - 1.04 - - - - 4.71 - - - - - -0.61 -2.65
-1.03 -2.13 - -2.22 -0.99 -2.12 -2.94 -0.2 -2.85 - - - -2.28 -2.82 -3.01 - - - - - - - 4.74 - - - - - - -
1.09 -1.23 -3.27 - -2.02 - - -3.32 - - - - - - - - - 2.27 - - - - 4.42 - - - - - -0.75 -3.35
- - - - -0.84 - - - - - - - -1.46 - - - - -1.34 - - - - 4.84 - - - - - - -
- 0.3 0.22 - - - - - - - - 0.7 0.14 -0.86 - 0.35 - -1.07 - - - - 4.5 - - - - - - -
-1.52 -2.02 -1.47 -0.91 -1.42 -1.56 -0.82 -0.66 -1.11 -1.52 -1.2 -0.63 -0.74 -0.6 -0.45 -0.38 -0.14 -1.26 -0.55 -0.29 -0.55 -1.01 3.81 -0.82 -0.5 -0.39 -0.48 -2.22 -0.55 -1.85
-4.47 -2.13 - - -3.89 - -3.04 - - -4.67 - - -2.55 -4.62 - - - 2.56 -4.48 - -3.65 -4.88 4.53 - -3.65 - - - - -4.72
- - - - - - - - - 1.61 - - - - - - - 3.51 - - - - 3.46 - 2.19 - - - - -
- - - - - - - - - - - - 1.04 - 1.33 - - 1.51 - - - - 4.5 - - - - - - -
-5.05 - - - - - - -5.12 -3.95 - - -5.08 -2.58 -3.91 -3.12 - -3.84 -0.78 -4.26 - - - 4.84 - - - - -3.97 -3.91 -
- - - - - - - - - - - 2.93 - - - - - 2.83 - - - - 3.93 - - - - - - -
-2.87 - - - - - - - - - - - - - - - - -0.68 - - - - 4.87 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
0.73 - - 0.5 1.37 - - - - - - - - - - - - - - - - - 4.53 - 0.26 - - - - -
0.87 -0.71 0.78 - 1.25 -1.03 - - - 0.68 - 0.65 0.12 - -1.03 - - 2.71 -0.78 - - - 2.04 - 0.91 -0.88 -1.26 1.31 -0.9 0.15
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
- - - - 0.47 - - - - - - - 0.75 - - - - 2.82 - - - - 4.29 - - - - - - -2.09
0.05 - 0.12 - - -0.09 - - - - - - - - - 0.3 - - - - - - 4.62 - - 0.1 - - - -
Spov3_chr3.04464 (LecRK-III.2)
- - - - - - - - - - - - - - - - - 2.67 - - - - 4.56 - - - - - - -
-3.77 -4.15 -3.6 -4.52 -2.39 -2.59 -3.27 -4.23 -4.91 -3.99 -4.19 -4.32 -1.76 -2.1 -2.96 -3.53 -3.63 0.47 -4.1 -4.47 -3.69 -3.64 4.7 -4.73 -4.67 -4.44 -4.36 -3.57 -3.46 -2.87
-6.78 -7.79 - - -5.21 - - - -9.96 -10.0 - -7.69 -2.98 -10.06 - - -7.07 0.33 -8.12 - - - 4.84 -9.12 -8.37 - - - -7.84 -
- - - - - - - - - - - - - - -3.1 - - - - - - - 4.9 - - - - - - -
- -0.13 - - - - - - - - - - - - - - - 2.37 0.62 - - - 4.43 -0.41 - - - - - -
-3.69 -1.49 -2.8 -3.7 -2.48 -2.58 -1.61 -5.26 -2.74 -3.4 -1.82 -3.88 -1.44 -2.79 -2.16 -3.22 -1.48 -2.11 -3.15 -3.93 -2.63 -3.01 4.63 -1.56 -3.11 -2.21 -2.12 -3.12 -2.06 -2.2
- 0.86 - - - - - - - - 0.75 - 1.76 - - - 0.88 2.17 - - 1.73 - 3.75 - - - - - - -
-0.72 - 0.37 - 1.03 - - - - - -0.68 - - - - - - 2.27 - - - - 4.28 - - - - - -0.57 -0.9
0.14 - -0.28 0.61 0.55 0.72 - - - 1.38 - - 1.56 - 0.72 0.03 - 1.98 - - - - 3.4 - - -0.43 - - - -
0.27 -2.19 -2.61 -0.26 0.88 -1.13 -2.48 -1.79 -0.97 -0.09 -2.33 -1.19 -0.26 -0.03 -0.78 -0.48 -0.73 2.05 - -0.78 -1.41 -1.69 3.5 - - -1.5 -0.98 -1.73 -1.0 -0.66
- - -1.74 - -1.11 - -1.85 -0.66 -1.8 -0.72 - -1.92 -1.72 - -1.95 - - 1.16 - -1.09 -1.2 -0.34 4.3 - 1.06 - -2.17 - -0.72 -
- - - - - - - - - 0.99 - - - - - - - 1.85 - - 0.63 - 4.26 - - - 1.86 - - -
-1.11 -3.22 -4.99 -4.54 -1.14 -5.69 -6.55 -6.36 - -4.87 -4.46 - -0.46 -3.2 -4.31 -6.26 - -1.03 -6.39 -5.62 -4.52 -6.75 4.75 -5.61 -4.53 - -5.11 -4.33 -2.3 -6.58
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
0.56 0.05 -1.08 -1.56 -0.47 -3.43 -3.38 -1.2 -1.43 -1.95 -3.25 -3.24 0.69 0.46 -1.64 -3.09 -2.87 0.57 -3.75 -3.21 -4.04 -3.68 4.08 -2.54 -3.05 -2.57 -2.45 -0.56 -0.81 -1.52
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
-4.08 -4.54 -5.66 -5.04 -1.93 -2.69 -3.37 -2.93 -4.81 -4.56 -4.08 -4.32 -1.6 -3.33 -2.21 -4.49 -4.07 -1.56 -3.67 -3.82 -4.86 -4.95 4.77 -3.91 -4.31 -4.26 -3.49 -3.88 -4.03 -4.26
-0.23 -0.26 -0.79 -0.93 -0.33 -0.84 -1.11 -0.86 -0.81 -0.96 -0.85 -0.85 -0.47 0.47 -0.33 -0.91 -0.9 0.39 -1.32 -1.23 -1.38 -1.05 3.53 -0.95 -1.08 -0.92 -0.89 -0.34 -0.59 -0.76
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
-2.34 -3.25 -4.53 -1.97 -1.93 -3.01 -3.59 -1.92 -4.15 -4.45 -4.27 -3.52 -3.33 - -2.5 -3.32 - -3.03 -3.27 -4.68 -3.43 -3.04 4.76 -2.91 -4.58 - - -3.14 -4.4 -4.35
-0.28 -0.9 -0.31 -1.46 -1.09 -3.11 -3.78 -3.34 -4.23 -4.33 -5.93 -5.29 -2.81 -1.68 -1.5 -3.83 -4.05 0.87 -4.56 -4.38 -5.36 -4.68 4.52 -5.03 -6.68 -6.38 -6.11 -3.36 -1.93 -1.7
-0.91 - - - -4.18 -2.74 - - - - - - -3.99 - - -4.07 - - - - - - 4.87 - - - - - - -
- - - - - - - - - - - - 2.06 - - - - - - - - - 4.69 - - - - - - -
- -3.21 - -3.23 -2.38 - - - -3.42 - -0.46 -3.43 -1.3 -1.05 -3.46 -1.17 -3.2 0.08 -2.37 -0.89 -0.72 -3.56 4.57 - -1.91 -3.28 -1.43 - - -2.29
-0.31 - - - -2.06 - -1.79 -1.07 - - - -0.9 1.66 0.34 - -2.8 - 2.19 0.18 - - - 4.09 - - - - - - -1.31
-2.28 -0.52 -2.99 -2.41 -0.57 -3.3 -2.63 -1.65 -3.34 -1.97 -2.92 -2.88 -1.15 -0.1 -1.21 -2.21 -0.91 1.4 -2.26 -3.31 -3.21 -2.67 4.25 -1.88 -1.44 -1.77 -0.65 -2.82 -4.07 -1.57
- - - - - - - - - - - - - - - - - 2.81 - - - - 4.52 - - - - - - -
Spov3_chr5.03491 (ROPGAP4)
-2.3 - - - -2.67 -2.18 - - - - - - -1.9 -1.6 -2.68 - - 0.96 - - - - 4.73 -2.71 - - - - - -
- - - -2.95 - - -3.2 - - - - - - - - - - -0.9 - - - - 4.86 - - - - - -3.01 -
- - - - - - - - - - - - - - - 1.61 - - - - - - 4.75 - - - - - - -
Spov3_chr5.04151 (UMAMIT34)
-1.8 -2.28 -1.52 -2.55 -3.53 - - -4.47 -2.58 -1.42 -5.29 -4.58 -1.12 - -5.58 - -2.84 -2.65 - -3.07 -3.29 -2.9 4.73 -5.3 -2.78 -3.54 -5.63 -3.6 -4.34 -2.9
Spov3_chr6.00620 (UMAMIT29)
- - - - - - - - - - - - - - - - - - - - - - 4.35 - - - 3.27 - - -
-4.22 -5.17 -3.77 -4.86 -2.58 -4.44 -2.83 -2.59 -3.04 -2.7 -2.53 -4.09 -3.43 -2.9 - -3.88 -6.24 -4.21 -3.1 -6.6 -4.34 -3.72 4.8 -5.45 -4.83 -5.51 -4.55 -2.65 -3.6 -6.36
- - -1.54 - -0.7 - -0.55 - - - - - -1.63 - - - - 2.26 - - -1.03 - 4.49 - - - - - - -1.67
-3.15 -3.3 -1.76 -3.39 -3.54 -2.04 -2.08 -3.37 - -2.5 -1.39 -0.75 -1.01 -1.89 -3.52 -2.48 -2.39 -2.69 - -2.13 -2.31 - 4.58 -1.3 -1.18 -1.41 -1.83 -1.33 - -
- - - - - - - - - - - - - - - - - - - - - - 4.91 - - - - - - -
-1.37 - - - -2.79 - - - -0.93 - -0.75 - 1.8 - - -1.51 -2.4 0.89 - - - -1.77 4.44 - - -2.48 - - - -1.64
- - - - - - - -0.91 - - - - - - - - - 0.95 - - - - 4.78 - - - - - - -
-2.4 -1.85 -2.26 -3.5 -0.96 -2.93 -2.27 -3.0 -1.49 -1.35 -1.65 -2.03 -0.8 -0.93 -2.22 -1.76 -1.6 0.08 -2.44 -1.83 -1.67 -1.67 4.37 -3.02 -2.03 -1.16 -1.27 -1.98 -2.05 -1.22
- - - - -1.88 - - - - - -0.54 0.3 -1.26 - - - - 1.76 -1.6 - - - 4.46 - - - - - - 0.79
-1.85 - -1.0 -2.32 - -0.23 - -1.91 - - -0.46 -2.16 -1.03 -2.05 - -0.45 - 1.9 - - - - 4.21 0.79 - - - 0.26 - -1.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.