Spov3_chr2.04978


Description : not classified


Gene families : OG0000866 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.04978
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr6.02320 GGCT2;1, AtGGCT2;1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA Interproscan
MF GO:0003678 DNA helicase activity IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009581 detection of external stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009582 detection of abiotic stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009583 detection of light stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009584 detection of visible light IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 515 670
IPR025476 Helitron_helicase-like 2 81
No external refs found!