Coexpression cluster: Cluster_135 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006807 nitrogen compound metabolic process 24.19% (15/62) 1.68 4.3e-05 0.008297
GO:0016740 transferase activity 16.13% (10/62) 1.73 0.00076 0.016391
GO:0008150 biological_process 32.26% (20/62) 1.06 0.000753 0.018261
GO:0008152 metabolic process 25.81% (16/62) 1.37 0.000288 0.018614
GO:0044238 primary metabolic process 22.58% (14/62) 1.33 0.000979 0.018984
GO:0009987 cellular process 24.19% (15/62) 1.32 0.000704 0.019502
GO:0044237 cellular metabolic process 19.35% (12/62) 1.59 0.000507 0.019662
GO:0071704 organic substance metabolic process 24.19% (15/62) 1.39 0.000424 0.02055
GO:0016301 kinase activity 11.29% (7/62) 2.24 0.00067 0.021664
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.29% (7/62) 2.03 0.001582 0.023606
GO:1901702 salt transmembrane transporter activity 3.23% (2/62) 5.14 0.00149 0.024092
GO:0003674 molecular_function 48.39% (30/62) 0.71 0.001366 0.0241
GO:0043170 macromolecule metabolic process 20.97% (13/62) 1.59 0.000287 0.027887
GO:0004672 protein kinase activity 9.68% (6/62) 2.12 0.00259 0.029558
GO:0035639 purine ribonucleoside triphosphate binding 12.9% (8/62) 1.74 0.002552 0.030942
GO:0016310 phosphorylation 9.68% (6/62) 2.14 0.002414 0.031218
GO:0032555 purine ribonucleotide binding 12.9% (8/62) 1.66 0.003569 0.031474
GO:0097367 carbohydrate derivative binding 12.9% (8/62) 1.64 0.003932 0.031786
GO:0032553 ribonucleotide binding 12.9% (8/62) 1.65 0.003787 0.031942
GO:0006468 protein phosphorylation 9.68% (6/62) 2.14 0.002352 0.032591
GO:0005672 transcription factor TFIIA complex 1.61% (1/62) 8.14 0.003552 0.032818
GO:0140096 catalytic activity, acting on a protein 12.9% (8/62) 1.62 0.004271 0.033142
GO:1901360 organic cyclic compound metabolic process 9.68% (6/62) 2.03 0.003456 0.033519
GO:0046483 heterocycle metabolic process 9.68% (6/62) 2.06 0.00314 0.03384
GO:0016773 phosphotransferase activity, alcohol group as acceptor 9.68% (6/62) 2.04 0.003335 0.034047
GO:0006796 phosphate-containing compound metabolic process 9.68% (6/62) 1.89 0.005489 0.034348
GO:0006793 phosphorus metabolic process 9.68% (6/62) 1.89 0.005489 0.034348
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 1.61% (1/62) 7.55 0.005324 0.035616
GO:0035145 exon-exon junction complex 1.61% (1/62) 7.55 0.005324 0.035616
GO:0032559 adenyl ribonucleotide binding 11.29% (7/62) 1.64 0.006917 0.036266
GO:0005524 ATP binding 11.29% (7/62) 1.73 0.004966 0.037051
GO:0017076 purine nucleotide binding 12.9% (8/62) 1.57 0.005176 0.037189
GO:1901265 nucleoside phosphate binding 12.9% (8/62) 1.5 0.006903 0.037197
GO:0000166 nucleotide binding 12.9% (8/62) 1.5 0.006903 0.037197
GO:0036211 protein modification process 9.68% (6/62) 1.86 0.006182 0.037475
GO:0090304 nucleic acid metabolic process 8.06% (5/62) 2.07 0.006819 0.038908
GO:1901564 organonitrogen compound metabolic process 14.52% (9/62) 1.35 0.008024 0.038915
GO:0043168 anion binding 12.9% (8/62) 1.51 0.006629 0.038968
GO:0140513 nuclear protein-containing complex 3.23% (2/62) 3.91 0.007939 0.039489
GO:0043412 macromolecule modification 9.68% (6/62) 1.78 0.007831 0.03998
GO:0036094 small molecule binding 12.9% (8/62) 1.45 0.008522 0.040322
GO:0005244 voltage-gated monoatomic ion channel activity 1.61% (1/62) 6.33 0.012379 0.042133
GO:0005247 voltage-gated chloride channel activity 1.61% (1/62) 6.33 0.012379 0.042133
GO:0022832 voltage-gated channel activity 1.61% (1/62) 6.33 0.012379 0.042133
GO:0006821 chloride transport 1.61% (1/62) 6.33 0.012379 0.042133
GO:0006367 transcription initiation at RNA polymerase II promoter 1.61% (1/62) 6.33 0.012379 0.042133
GO:0008308 voltage-gated monoatomic anion channel activity 1.61% (1/62) 6.33 0.012379 0.042133
GO:0005488 binding 32.26% (20/62) 0.76 0.009251 0.042731
GO:0090575 RNA polymerase II transcription regulator complex 1.61% (1/62) 6.14 0.014136 0.042848
GO:0006771 riboflavin metabolic process 1.61% (1/62) 6.14 0.014136 0.042848
GO:0042727 flavin-containing compound biosynthetic process 1.61% (1/62) 6.14 0.014136 0.042848
GO:0009231 riboflavin biosynthetic process 1.61% (1/62) 6.14 0.014136 0.042848
GO:0042726 flavin-containing compound metabolic process 1.61% (1/62) 6.14 0.014136 0.042848
GO:0006725 cellular aromatic compound metabolic process 8.06% (5/62) 1.8 0.01454 0.043397
GO:0006950 response to stress 4.84% (3/62) 2.62 0.013025 0.043567
GO:0006139 nucleobase-containing compound metabolic process 8.06% (5/62) 1.89 0.011298 0.043835
GO:0005254 chloride channel activity 1.61% (1/62) 5.97 0.015888 0.044034
GO:0005253 monoatomic anion channel activity 1.61% (1/62) 5.97 0.015888 0.044034
GO:0015108 chloride transmembrane transporter activity 1.61% (1/62) 5.97 0.015888 0.044034
GO:0008509 monoatomic anion transmembrane transporter activity 1.61% (1/62) 5.97 0.015888 0.044034
GO:0061630 ubiquitin protein ligase activity 1.61% (1/62) 5.97 0.015888 0.044034
GO:0030554 adenyl nucleotide binding 11.29% (7/62) 1.55 0.009798 0.044204
GO:0006281 DNA repair 3.23% (2/62) 3.73 0.010098 0.044521
GO:0043167 ion binding 17.74% (11/62) 1.08 0.013552 0.044562
GO:0051716 cellular response to stimulus 3.23% (2/62) 3.64 0.011264 0.044595
GO:0033554 cellular response to stress 3.23% (2/62) 3.64 0.011264 0.044595
GO:0006974 DNA damage response 3.23% (2/62) 3.64 0.011264 0.044595
GO:0019538 protein metabolic process 12.9% (8/62) 1.39 0.010621 0.044794
GO:0003729 mRNA binding 1.61% (1/62) 6.55 0.01062 0.045785
GO:0034641 cellular nitrogen compound metabolic process 9.68% (6/62) 1.65 0.012205 0.046429
GO:0006284 base-excision repair 1.61% (1/62) 5.81 0.017639 0.047526
GO:0061659 ubiquitin-like protein ligase activity 1.61% (1/62) 5.81 0.017639 0.047526
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.23% (2/62) 3.27 0.01851 0.049191
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_56 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_125 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_144 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_198 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_212 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_219 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_225 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_226 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_251 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_268 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_277 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_101 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_108 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_112 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_162 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_180 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_251 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_22 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_23 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_24 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.021 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_64 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_67 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_72 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_78 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_81 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_83 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_96 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_112 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_234 0.023 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_285 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_421 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_548 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms