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  5. Bra009406

Bra009406


Description : EC_3.1 hydrolase acting on ester bond. pectin methylesterase


Gene families : OG0007321 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra009406
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_73


Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007266 Rho protein signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 324 621
IPR006501 Pectinesterase_inhib_dom 104 252
No external refs found!