Spov3_chr2.02281 (ATPUB13, PUB13)

Aliases : ATPUB13, PUB13

Description : E3 ubiquitin ligase

Gene families : OG0019410 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr2.02281
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_84

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090407	organophosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	469	507
IPR000225	Armadillo	551	590
IPR000225	Armadillo	386	425
IPR003613	Ubox_domain	259	329

External Links

No external refs found!

Spov3_chr2.02281 (ATPUB13, PUB13)

Expression Profile

Co-expression Networks

Functional Annotation