Spov3_chr2.00424 (EMB1075, ATSDC1, SDC1)

Aliases : EMB1075, ATSDC1, SDC1

Description : serine decarboxylase

Gene families : OG0064285 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr2.00424
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_148

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006790	sulfur compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008235	metalloexopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070006	metalloaminopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	189	402

External Links

No external refs found!

Spov3_chr2.00424 (EMB1075, ATSDC1, SDC1)

Expression Profile

Co-expression Networks

Functional Annotation