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  5. Spov3_chr1.05160

Spov3_chr1.05160 (MUM4, ATRHM2, RHM2, ATMUM4)


Aliases : MUM4, ATRHM2, RHM2, ATMUM4

Description : UDP-L-rhamnose synthase *(RHM)


Gene families : OG0001587 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.05160
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_150


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006665 sphingolipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006672 ceramide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 315
IPR029903 RmlD-like-bd 388 558
No external refs found!