Bra009121 (AL1)

Aliases : AL1

Description : methylation reader Alfin of PRC1 complex

Gene families : OG0004060 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004060_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra009121
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_126

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0008290	F-actin capping protein complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030837	negative regulation of actin filament polymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032272	negative regulation of protein polymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043242	negative regulation of protein-containing complex disassembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051016	barbed-end actin filament capping	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051693	actin filament capping	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901879	regulation of protein depolymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901880	negative regulation of protein depolymerization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021998	Alfin_N	10	136
IPR019787	Znf_PHD-finger	187	235

External Links

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Bra009121 (AL1)

Expression Profile

Co-expression Networks

Functional Annotation